Co-expression analysis

Gene ID TaAffx.108096.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g18010: auxin-responsive family protein (HF=4e+0)
Module size 10 genes
NF 0.17
%ile 30.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4565.20.87TaAffx.108096.1.S1_atCA659463--4e+0At2g18010auxin-responsive family proteinO.I.H.G.S.X.
0.4058.40.90TaAffx.108170.4.S1_atCA689645--2e+1At3g17609HYH (HY5-HOMOLOG)O.I.H.G.S.X.
0.3854.70.91TaAffx.30708.1.S1_atCA622731--2e-7At4g01480AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)O.I.H.G.S.X.
0.3142.70.92TaAffx.113098.1.S1_atCA618075--1e+0At2g27130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3142.70.93TaAffx.95641.1.S1_atCA620605--3e-7At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.2939.20.94TaAffx.110179.1.S1_atCA662677--3e-8At5g16340AMP-binding protein, putativeO.I.H.G.S.X.
0.2227.10.91TaAffx.27272.1.S1_atCA678926--4e+0At5g20165unknown proteinO.I.H.G.S.X.
0.2125.50.92TaAffx.51913.1.S1_x_atCA716536--8e-1At5g56110ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)O.I.H.G.S.X.
0.0910.40.88TaAffx.112720.1.S1_x_atCA621571--7e-5At5g39580peroxidase, putativeO.I.H.G.S.X.
0.078.60.89TaAffx.121220.2.S1_atCA677165Harpin binding protein 1-4e+0At5g50030invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.199.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.999.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.799.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.698.7GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM246391SB62_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
6.298.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.897.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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