Co-expression analysis

Gene ID	TaAffx.108096.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g18010: auxin-responsive family protein (HF=4e+0)
Module size	10 genes
NF	0.17
%ile	30.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.45	65.2	0.87	TaAffx.108096.1.S1_at	CA659463	-	-	4e+0	At2g18010	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.90	TaAffx.108170.4.S1_at	CA689645	-	-	2e+1	At3g17609	HYH (HY5-HOMOLOG)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.91	TaAffx.30708.1.S1_at	CA622731	-	-	2e-7	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.92	TaAffx.113098.1.S1_at	CA618075	-	-	1e+0	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.93	TaAffx.95641.1.S1_at	CA620605	-	-	3e-7	At5g23950	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.94	TaAffx.110179.1.S1_at	CA662677	-	-	3e-8	At5g16340	AMP-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.91	TaAffx.27272.1.S1_at	CA678926	-	-	4e+0	At5g20165	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.92	TaAffx.51913.1.S1_x_at	CA716536	-	-	8e-1	At5g56110	ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.88	TaAffx.112720.1.S1_x_at	CA621571	-	-	7e-5	At5g39580	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.89	TaAffx.121220.2.S1_at	CA677165	Harpin binding protein 1	-	4e+0	At5g50030	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.1	99.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
9.9	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.7	99.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.6	98.7	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.7	98.4	GSM246391	SB62_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
6.2	98.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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