Co-expression analysis

Gene ID TaAffx.107886.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g66450: phosphatidic acid phosphatase-related / PAP2-related (HF=2e+0)
Module size 19 genes
NF 0.23
%ile 39.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9298.50.88TaAffx.107886.1.S1_atCA693896--2e+0At5g66450phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.5072.40.92TaAffx.83245.1.S1_atCA659822--1e+1At3g01940unknown proteinO.I.H.G.S.X.
0.3346.90.93TaAffx.80304.1.S1_s_atCA698618--4e+0At3g22070proline-rich family proteinO.I.H.G.S.X.
0.3244.40.95TaAffx.54509.1.S1_atCA680633--2e-2At4g38250amino acid transporter family proteinO.I.H.G.S.X.
0.3244.40.94TaAffx.108876.1.S1_atCA684367--2e+0At4g05350zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3040.90.94Ta.29509.2.S1_atCA698053--2e-5At1g63960unknown proteinO.I.H.G.S.X.
0.2939.20.93TaAffx.81884.1.S1_atCA733636--1e+0At5g66490unknown proteinO.I.H.G.S.X.
0.2735.60.94Ta.11853.2.S1_x_atCA666021--4e+0At5g47080CKB1O.I.H.G.S.X.
0.2735.60.94Ta.24621.2.S1_x_atCA640800--4e+0At5g47080CKB1O.I.H.G.S.X.
0.2532.10.93TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.2227.10.93TaAffx.107510.1.S1_atCA698707--1e-1At4g37210tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.1821.00.93TaAffx.24426.1.S1_atCA719619--3e+0At5g44430PDF1.2c (plant defensin 1.2c)O.I.H.G.S.X.
0.1821.00.95Ta.29509.2.S1_x_atCA698053--2e-5At1g63960unknown proteinO.I.H.G.S.X.
0.1719.80.92TaAffx.85619.1.S1_atCA621118--7e-8At1g06040STO (SALT TOLERANCE)O.I.H.G.S.X.
0.1618.20.94TaAffx.110040.1.S1_atCA664997--4e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1517.10.94TaAffx.108775.1.S1_atCA684251--3e+0At5g47570unknown proteinO.I.H.G.S.X.
0.1517.10.95Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.1112.40.93TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.067.60.95Ta.29215.1.S1_atCD934480--5e-5At1g73650oxidoreductase, acting on the CH-CH group of donorsO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.099.1GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
9.099.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
6.398.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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