Co-expression analysis

Gene ID TaAffx.107663.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g79480: - (HF=3e+0)
Module size 6 genes
NF 0.05
%ile 13.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.80TaAffx.107663.1.S1_atCA696934--3e+0At1g79480-O.I.H.G.S.X.
0.1517.10.91Ta.27979.1.S1_atCD923810--4e+0At5g28590DNA-binding protein-relatedO.I.H.G.S.X.
0.1415.80.92TaAffx.78545.2.S1_atCA627335WRKY39 transcription factor-4e-3At4g33780-O.I.H.G.S.X.
0.045.80.92TaAffx.38268.1.A1_atBJ242361--1e+0At1g21326VQ motif-containing proteinO.I.H.G.S.X.
0.034.70.92TaAffx.119476.1.S1_atBJ241080--1e+0At1g07240UGT71C5 (UDP-GLUCOSYL TRANSFERASE 71C5)O.I.H.G.S.X.
0.012.40.94Ta.12360.1.A1_atCA648024--4e+0At1g70220unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.599.8GSM314267tissue type: seedling, leaf - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM314268tissue type: seedling, leaf - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.795.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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