Co-expression analysis

Gene ID	TaAffx.107156.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g31670: - (HF=8e-1)
Module size	6 genes
NF	0.48
%ile	74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	93.4	0.93	TaAffx.107156.1.S1_at	CA705156	-	-	8e-1	At2g31670	-	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.94	TaAffx.132743.1.S2_at	CA682115	-	-	1e-15	Atcg00070	-	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	TaAffx.4544.1.S1_at	CA742649	-	-	2e-36	Atcg01040	-	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.96	TaAffx.5832.1.S1_at	CA697645	-	-	7e-75	Atcg00190	-	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.96	TaAffx.134856.3.S1_s_at	CA668590	-	-	4e+0	At5g51460	ATTPPA	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.94	TaAffx.54024.1.S1_at	CA686681	-	-	2e-2	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
64.7	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
30.3	99.8	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
24.6	99.8	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.3	95.0	GSM324489	Si- B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.2	91.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.2	91.0	GSM143512	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.0	89.7	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.0	89.7	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.0	89.7	GSM143513	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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