Co-expression analysis

Gene ID	TaAffx.106876.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g44150: ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) (HF=3e-1)
Module size	6 genes
NF	0.00
%ile	0.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.69	TaAffx.106876.1.S1_at	CA709831	-	-	3e-1	At2g44150	ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.92	Ta.9470.3.S1_at	CA667981	-	-	4e+0	At2g04890	SCL21 (SCARECROW-LIKE 21)	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.92	Ta.9049.2.A1_at	CA606630	-	-	3e-1	At2g19480	NAP1	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.92	Ta.7894.3.A1_at	CA680072	-	-	4e+0	At3g51300	ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1)	O.I.	H.G.	S.X.	Please select
-	0.7	0.84	TaAffx.26027.1.S1_at	CA692935	-	-	3e+0	At5g03530	RABC2A (RAB GTPASE HOMOLOG C2A)	O.I.	H.G.	S.X.	Please select
-	0.7	0.87	Ta.3159.1.S1_at	BJ228678	-	-	5e+0	At4g27880	seven in absentia (SINA) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	98.6	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
7.0	98.5	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.6	97.8	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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