Co-expression analysis

Gene ID	TaAffx.106456.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g05070: - (HF=4e+0)
Module size	6 genes
NF	0.02
%ile	6.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.82	TaAffx.106456.1.S1_at	CA718605	-	-	4e+0	At3g05070	-	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.96	Ta.1092.1.S1_at	CK210651	-	-	6e-26	At5g11900	eukaryotic translation initiation factor SUI1 family protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.97	Ta.12680.1.S1_at	CD902436	-	-	3e-21	At3g05760	nucleic acid binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.94	TaAffx.119135.1.S1_x_at	AJ615948	-	-	3e+0	At5g26717	-	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.96	Ta.3506.1.A1_at	CK164880	-	-	9e-2	At1g05205	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.95	TaAffx.103133.1.S1_at	CD883640	-	-	2e+0	At2g32310	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.7	99.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
10.7	99.2	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.4	99.1	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.9	96.1	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.5	95.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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