Co-expression analysis

Gene ID	TaAffx.106421.1.S1_at
Gene name	zinc transporter ZIP
Homology with Arabidopsis	Similar to At5g62160: AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR) (HF=3e+0)
Module size	7 genes
NF	0.43
%ile	68.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.85	TaAffx.106421.1.S1_at	CD933478	zinc transporter ZIP	-	3e+0	At5g62160	AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	Ta.4105.1.S1_at	BJ258955	-	-	1e+0	At2g37470	histone H2B, putative	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.89	TaAffx.23640.1.S1_at	CA732432	-	-	1e+0	At4g31730	GDU1 (GLUTAMINE DUMPER 1)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.92	Ta.18731.1.S1_a_at	CD491978	-	-	2e+0	At3g60840	MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.89	Ta.8031.1.A1_at	CK193031	-	-	2e+0	At1g58225	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.89	TaAffx.59301.1.S1_at	AJ603987	-	-	6e-1	At5g62250	MAP65-9 (MICROTUBULE-ASSOCIATED PROTEIN 65-9)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.88	Ta.10358.1.A1_at	BJ320328	-	-	5e-1	At4g26760	MAP65-2	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.5	99.3	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
11.5	99.3	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.3	99.2	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
10.0	99.1	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.9	99.1	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
9.6	99.1	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM246395	SB69_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
5.6	97.8	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.2	97.5	GSM314267	tissue type: seedling, leaf - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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