Co-expression analysis

Gene ID	TaAffx.106312.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g16440: ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B) (HF=2e+0)
Module size	35 genes
NF	0.24
%ile	39.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.96	99.3	0.84	TaAffx.106312.1.S1_at	CA720457	-	-	2e+0	At3g16440	ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.93	Ta.7295.3.S1_x_at	CA611407	-	-	4e-3	At2g23420	NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.90	Ta.3861.1.S1_at	BQ162138	-	-	2e+0	At5g65870	ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.93	TaAffx.8043.1.S1_at	CA638319	-	-	2e+0	At5g49010	SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.90	TaAffx.106201.2.S1_s_at	CA723284	-	-	3e+0	At4g30510	AtATG18b	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.93	Ta.7193.2.S1_at	BG904530	-	-	3e+0	At2g34690	ACD11 (ACCELERATED CELL DEATH 11)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.93	TaAffx.117120.1.S1_at	BQ608896	-	-	4e+0	At1g56700	pyrrolidone-carboxylate peptidase family protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.92	TaAffx.30652.1.S1_at	CA623146	-	-	3e-4	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.93	TaAffx.29371.1.S1_at	CA644147	-	-	4e+0	At5g18310	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.92	TaAffx.7765.1.S1_at	CA650604	-	-	2e-1	At4g33870	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.93	TaAffx.112205.1.S1_at	CA626060	-	-	4e+0	At2g36160	40S ribosomal protein S14 (RPS14A)	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.92	TaAffx.50779.1.S1_at	CA735503	-	-	3e+0	At5g55460	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.94	TaAffx.23743.1.S1_at	CA731059	-	-	3e-1	At2g28790	osmotin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.92	TaAffx.98068.1.A1_at	BQ168843	-	-	6e+0	At5g07540	GRP16 (GLYCINE-RICH PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.92	TaAffx.27146.1.S1_at	CA680595	-	-	4e+0	At1g77450	anac032 (Arabidopsis NAC domain containing protein 32)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.92	TaAffx.83109.1.S1_at	CA661860	-	-	1e+0	At3g49796	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.93	TaAffx.57555.1.S1_at	CA618738	-	-	2e+1	At5g67600	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.94	TaAffx.110167.1.S1_at	CA662870	-	-	4e+0	At4g14440	HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.93	TaAffx.83840.1.S1_at	CA649783	-	-	4e+0	At1g28170	sulfotransferase family protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.96	Ta.3911.2.S1_s_at	CA604151	-	-	4e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.93	Ta.5258.1.S1_at	CK207008	-	-	2e-3	At2g35780	scpl26 (serine carboxypeptidase-like 26)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.93	TaAffx.59306.1.S1_at	CA603735	-	-	1e+0	At4g22570	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.91	Ta.28579.2.S1_at	CA611367	-	-	4e+0	At5g67580	TRB2	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.90	TaAffx.29693.1.S1_at	CA637086	-	-	4e+0	At5g51110	4-alpha-hydroxytetrahydrobiopterin dehydratase	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.93	Ta.7193.3.S1_at	CA718160	-	-	1e+1	At5g08400	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.94	TaAffx.51397.1.S1_at	CA725473	-	-	4e-49	At1g23490	ATARF1 (ADP-RIBOSYLATION FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.92	Ta.1305.3.S1_at	CA641627	-	-	7e-45	At1g13950	ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.94	TaAffx.50210.1.S1_at	CA744417	-	-	7e-2	At1g60880	AGL56	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.92	Ta.18034.1.S1_at	CA627515	-	-	1e-2	At5g62900	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.92	TaAffx.13785.2.S1_at	CA708591	-	-	7e-8	At2g34690	ACD11 (ACCELERATED CELL DEATH 11)	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.92	TaAffx.81875.1.S1_at	CA680694	-	-	4e+0	At4g40045	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.94	TaAffx.34241.2.S1_at	CA722326	-	-	4e+0	At5g51960	-	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.96	TaAffx.119081.1.S1_at	BJ291857	-	-	2e+1	At5g45700	NLI interacting factor (NIF) family protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.91	Ta.26389.1.A1_at	CD490619	-	-	4e-10	At3g03910	GDH3 (GLUTAMATE DEHYDROGENASE 3)	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.94	TaAffx.34241.2.S1_x_at	CA722326	-	-	4e+0	At5g51960	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.7	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.8	98.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7	97.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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