Co-expression analysis

Gene ID	TaAffx.106098.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g51120: PABN1 (POLYADENYLATE-BINDING PROTEIN 1) (HF=4e+0)
Module size	15 genes
NF	0.23
%ile	39.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	83.6	0.89	TaAffx.106098.1.S1_at	CA725601	-	-	4e+0	At5g51120	PABN1 (POLYADENYLATE-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.90	TaAffx.113656.1.S1_at	CA607407	-	-	3e-1	At2g36255	-	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.91	TaAffx.117321.1.S1_s_at	BQ606659	-	-	4e+0	At1g71780	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.90	TaAffx.112085.1.S1_at	CA627212	-	-	4e+0	At4g15710	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.90	TaAffx.31195.1.S1_at	CA618611	-	-	8e-1	At1g21770	-	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.92	TaAffx.111721.1.S1_at	CA634767	-	-	4e+0	At5g08770	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.93	Ta.20393.1.S1_x_at	CA485809	-	-	3e-1	At1g78320	ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.92	TaAffx.50913.1.S1_at	CA733503	-	-	2e+1	At4g09467	-	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.95	TaAffx.25411.1.S1_at	CA700489	-	-	4e+0	At4g35320	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.93	Ta.16574.1.S1_at	CA608765	-	-	4e+0	At5g49015	Expressed protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.93	TaAffx.30726.1.S1_at	CA622623	-	-	1e+1	At5g20500	glutaredoxin, putative	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.92	TaAffx.30811.1.S1_at	CA621874	-	-	2e-1	At3g19070	cell wall protein-related	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.93	TaAffx.30610.1.S1_at	CA623663	-	-	1e+1	At5g60890	MYB34 (MYB DOMAIN PROTEIN 34)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.91	TaAffx.78834.1.S1_x_at	CA727217	-	-	4e-3	At2g21330	fructose-bisphosphate aldolase, putative	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.92	Ta.29468.1.S1_at	CA630486	-	-	1e+0	At2g03937	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	99.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.9	99.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.4	98.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.3	97.6	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
5.2	97.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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