Co-expression analysis

Gene ID TaAffx.105661.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g18790: ribosomal protein L33 family protein (HF=2e-2)
Module size 6 genes
NF 0.01
%ile 2.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.74TaAffx.105661.1.S1_atCA731426--2e-2At5g18790ribosomal protein L33 family proteinO.I.H.G.S.X.
0.1314.60.94TaAffx.59512.1.S1_atCA599535--4e+0At5g22290anac089 (Arabidopsis NAC domain containing protein 89)O.I.H.G.S.X.
0.089.40.94TaAffx.113485.1.S1_atCA611026--3e-16At1g34470permease-relatedO.I.H.G.S.X.
0.023.60.94Ta.3036.3.S1_x_atCA656850--2e-1At5g46020unknown proteinO.I.H.G.S.X.
-0.70.89TaAffx.58563.1.S1_x_atCA618497--4e+0At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.S.X.
-0.70.93TaAffx.77638.1.S1_atCA744878--7e-1At5g64330NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.599.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
15.299.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
14.499.5GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
8.398.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.098.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.898.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.298.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.797.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.196.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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