Co-expression analysis

Gene ID	TaAffx.105660.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g01015: - (HF=1e-3)
Module size	6 genes
NF	0.61
%ile	86.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.95	TaAffx.105660.1.S1_at	CA731441	-	-	1e-3	At3g01015	-	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	TaAffx.29673.1.S1_at	CA637588	-	-	7e+0	At5g14240	-	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	TaAffx.107438.1.S1_at	CA699780	-	-	1e-2	At3g26110	-	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	TaAffx.65688.1.S1_at	BJ232502	-	-	2e+1	At3g02480	ABA-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	TaAffx.113024.3.S1_at	CA618057	-	-	3e-1	At5g26700	germin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.95	TaAffx.53587.2.S1_at	CA697989	-	-	7e-2	At4g34290	SWIB complex BAF60b domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
32.5	99.9	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
19.0	99.7	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
12.2	99.4	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
11.7	99.3	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
11.1	99.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.8	99.1	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
9.1	99.0	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
8.4	98.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.4	98.9	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.9	98.7	GSM111208	genotype F36 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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