Co-expression analysis

Gene ID TaAffx.105660.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01015: - (HF=1e-3)
Module size 6 genes
NF 0.61
%ile 86.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.95TaAffx.105660.1.S1_atCA731441--1e-3At3g01015-O.I.H.G.S.X.
0.6786.30.95TaAffx.29673.1.S1_atCA637588--7e+0At5g14240-O.I.H.G.S.X.
0.5576.80.95TaAffx.107438.1.S1_atCA699780--1e-2At3g26110-O.I.H.G.S.X.
0.5576.80.95TaAffx.65688.1.S1_atBJ232502--2e+1At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.
0.5072.40.96TaAffx.113024.3.S1_atCA618057--3e-1At5g26700germin-like protein, putativeO.I.H.G.S.X.
0.3651.90.95TaAffx.53587.2.S1_atCA697989--7e-2At4g34290SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
32.599.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
19.099.7GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
12.299.4GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.799.3GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.199.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.899.1GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
9.199.0GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.498.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.498.9GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.998.7GSM111208genotype F36 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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