Co-expression analysis

Gene ID	TaAffx.105253.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g10430: - (HF=4e+0)
Module size	6 genes
NF	0.69
%ile	92.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.87	TaAffx.105253.1.S1_at	CA737190	-	-	4e+0	At4g10430	-	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.87	TaAffx.82073.1.S1_at	CA677986	-	-	3e-1	At1g29780	NLI interacting factor (NIF) family protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.82	TaAffx.56371.1.S1_at	CA653232	-	-	4e+0	At5g58560	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.84	TaAffx.128541.6.S1_at	CA680507	-	-	6e+0	At4g23600	CORI3 (CORONATINE INDUCED 1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.89	TaAffx.105253.1.S1_x_at	CA737190	-	-	4e+0	At4g10430	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.87	TaAffx.107856.1.S1_at	CA694359	-	-	4e+0	At5g52605	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.1	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
13.5	99.5	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
11.5	99.3	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
10.4	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.7	99.1	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.0	98.5	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.8	98.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.5	98.3	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.1	98.1	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5	97.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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