Co-expression analysis

Gene ID TaAffx.104796.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g07590: small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative (HF=3e+0)
Module size 11 genes
NF 0.40
%ile 64.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.80TaAffx.104796.1.S1_x_atCA744716--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.5072.40.86Ta.578.1.S1_atBE489213--9e-1At3g48185unknown proteinO.I.H.G.S.X.
0.5072.40.86Ta.6578.3.A1_atBJ308193--1e+0At2g31200ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)O.I.H.G.S.X.
0.4869.00.85Ta.1391.2.S1_atCK211679--9e-11At2g24090ribosomal protein L35 family proteinO.I.H.G.S.X.
0.4666.80.89Ta.17974.1.A1_atCA623388--4e-11At1g56045ribosomal protein L41 family proteinO.I.H.G.S.X.
0.3753.00.85TaAffx.86216.1.S1_atCA613951--1e+0At4g18580unknown proteinO.I.H.G.S.X.
0.3346.90.86TaAffx.29059.1.S1_x_atCA651336--1e+0At1g61520LHCA3O.I.H.G.S.X.
0.3142.70.91Ta.17937.1.S1_atCA626136--2e+0At3g48450nitrate-responsive NOI protein, putativeO.I.H.G.S.X.
0.3142.70.91TaAffx.131855.1.S1_atCA695496--6e+0At3g01516unknown proteinO.I.H.G.S.X.
0.2430.30.88TaAffx.83608.1.S1_atCA655505--4e+0At4g10390protein kinase family proteinO.I.H.G.S.X.
0.2227.10.85TaAffx.35314.1.S1_atBQ609804--3e+0At3g49305-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.799.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
10.799.2GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
10.599.2GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.498.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.398.8GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
7.598.6GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.498.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.398.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.698.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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