Co-expression analysis

Gene ID TaAffx.10325.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g44195: unknown protein (HF=7e-2)
Module size 37 genes
NF 0.21
%ile 35.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.60.92TaAffx.10325.2.S1_atBJ314917--7e-2At2g44195unknown proteinO.I.H.G.S.X.
0.4260.90.94Ta.5553.2.S1_x_atCA611935--6e-1At1g02000GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)O.I.H.G.S.X.
0.3854.70.95TaAffx.116998.1.S1_atCD935429--5e+0At5g25940early nodulin-relatedO.I.H.G.S.X.
0.3448.10.94TaAffx.131614.1.S1_atCA639837--1e+0At1g43860transcription factorO.I.H.G.S.X.
0.3346.90.94TaAffx.5508.1.S1_atCA708621--3e-7At2g18170ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7)O.I.H.G.S.X.
0.3346.90.92Ta.4302.3.S1_x_atCD875950--2e-6At2g34590transketolase family proteinO.I.H.G.S.X.
0.3244.40.94Ta.13851.2.S1_x_atCA651591--2e-14At2g03120ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)O.I.H.G.S.X.
0.2939.20.96TaAffx.122684.1.S1_atCK204780--2e-6At1g13900calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.2735.60.94TaAffx.81577.1.S1_s_atCA684368--5e+0At5g53588CPuORF50 (Conserved peptide upstream open reading frame 50)O.I.H.G.S.X.
0.2735.60.92Ta.4302.3.S1_a_atCD875950--2e-6At2g34590transketolase family proteinO.I.H.G.S.X.
0.2633.60.95Ta.2059.3.S1_a_atBQ172140--6e-5At5g65620peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.2532.10.95Ta.30714.1.S1_atCN009705--1e+0At5g17500glycosyl hydrolase family 5 protein / cellulase family proteinO.I.H.G.S.X.
0.2329.00.95TaAffx.67799.1.S1_atBE516875--2e+1At5g55460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2329.00.94TaAffx.99198.1.S1_atCK209526--4e-1At1g08460HDA08O.I.H.G.S.X.
0.2125.50.94Ta.9529.3.S1_atBJ257372--2e-3At2g31810acetolactate synthase small subunit, putativeO.I.H.G.S.X.
0.2125.50.94TaAffx.119537.1.S1_atBJ268946--2e-1At5g44720molybdenum cofactor sulfurase family proteinO.I.H.G.S.X.
0.2125.50.96Ta.5530.1.S1_atCK198647--4e+0At1g70944unknown proteinO.I.H.G.S.X.
0.2024.00.93Ta.17075.1.S1_atCA617315--5e-10At1g79350EMB1135 (embryo defective 1135)O.I.H.G.S.X.
0.2024.00.94Ta.20440.1.S1_atBQ238761--2e-2At1g15290bindingO.I.H.G.S.X.
0.1922.40.95TaAffx.55647.1.S1_s_atCA663166--9e-6At5g09400KUP7O.I.H.G.S.X.
0.1922.40.96Ta.3559.2.S1_a_atCA697904--5e-12At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)O.I.H.G.S.X.
0.1821.00.96Ta.7044.2.S1_atCA599368--4e+0At5g46250RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1821.00.97Ta.7012.2.S1_x_atCA708999--3e-15At1g79870oxidoreductase family proteinO.I.H.G.S.X.
0.1719.80.96TaAffx.88821.1.S1_atCA638506--3e-9At5g06950AHBP-1BO.I.H.G.S.X.
0.1719.80.96Ta.7295.3.S1_a_atCA611407--4e-3At2g23420NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2)O.I.H.G.S.X.
0.1719.80.95Ta.30353.3.S1_a_atCA639985--9e-23At5g12040carbon-nitrogen hydrolase family proteinO.I.H.G.S.X.
0.1719.80.96Ta.7012.2.S1_atCA708999--3e-15At1g79870oxidoreductase family proteinO.I.H.G.S.X.
0.1618.20.96Ta.28828.1.S1_s_atCA614417--1e-5At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)O.I.H.G.S.X.
0.1618.20.96Ta.9020.2.S1_a_atBQ606451--1e+0At5g03030DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.1517.10.94Ta.14119.2.S1_a_atCA653400--4e-3At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.1314.60.94TaAffx.109230.1.S1_atCA604393--1e+0At4g02770PSAD-1 (photosystem I subunit D-1)O.I.H.G.S.X.
0.1314.60.96Ta.13425.1.S1_atCK211578--2e-29At4g08790nitrilase, putativeO.I.H.G.S.X.
0.1213.30.95Ta.11254.2.S1_atCA638530--1e+0At5g13450ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putativeO.I.H.G.S.X.
0.1011.30.96Ta.14554.3.S1_x_atCK196332--1e-10At2g22780PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1)O.I.H.G.S.X.
0.0910.40.94Ta.8326.1.A1_atBQ161743--5e+0At4g18890brassinosteroid signalling positive regulator-relatedO.I.H.G.S.X.
0.089.40.95Ta.19204.2.S1_atCA717149--3e-2At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.H.G.S.X.
0.089.40.95Ta.28571.1.S1_s_atCA639817--8e-5At3g47810MAG1 (MAIGO 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.1GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage