Co-expression analysis

Gene ID	Ta.9750.3.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g18380: transcription factor (HF=2e+0)
Module size	7 genes
NF	0.48
%ile	73.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.89	Ta.9750.3.S1_at	CA734822	-	-	2e+0	At2g18380	transcription factor	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	TaAffx.23369.3.A1_at	CA735914	-	-	1e+0	At4g31760	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.90	TaAffx.111939.1.S1_at	CA629962	-	-	2e+0	At5g18020	auxin-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.93	TaAffx.50825.1.S1_at	CA734908	-	-	4e-1	At5g52740	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.93	Ta.10063.2.S1_at	CA671032	-	-	1e+0	At1g43667	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.92	Ta.7987.2.S1_at	CA622553	-	-	6e+0	At2g11522	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.92	Ta.28228.2.S1_at	CA633922	-	-	1e-6	At1g62750	SCO1 (SNOWY COTYLEDON 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.7	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
10.3	99.2	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.7	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.0	99.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.2	98.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0	98.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.1	97.5	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.3	96.7	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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