Co-expression analysis

Gene ID	Ta.9706.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g40550: unknown protein (HF=3e-3)
Module size	6 genes
NF	0.32
%ile	52.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	69.0	0.95	Ta.9706.1.S1_a_at	BQ169555	-	-	3e-3	At5g40550	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.66882.1.A1_at	AJ614600	-	-	1e+0	At3g29030	EXPA5 (EXPANSIN A5)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.4934.1.S1_x_at	BJ302944	-	-	8e-2	At2g34750	RNA polymerase I specific transcription initiation factor RRN3 family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.4934.1.S1_at	BJ302944	-	-	8e-2	At2g34750	RNA polymerase I specific transcription initiation factor RRN3 family protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.95	Ta.1307.2.A1_s_at	BJ285945	-	-	4e+0	At3g12890	ASML2 (ACTIVATOR OF SPOMIN::LUC2)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.95	TaAffx.83860.1.S1_s_at	CA609072	-	-	4e+0	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	96.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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