Co-expression analysis

Gene ID Ta.9700.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g49030: OVA2 (ovule abortion 2) (HF=5e-6)
Module size 7 genes
NF 0.49
%ile 75.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.20.95Ta.9700.1.S1_x_atCK154348--5e-6At5g49030OVA2 (ovule abortion 2)O.I.H.G.S.X.
0.6383.10.95Ta.29314.3.A1_a_atAJ609767--4e+0At5g18150unknown proteinO.I.H.G.S.X.
0.5779.20.95Ta.1434.1.A1_atBE429591--3e+0At5g18404unknown proteinO.I.H.G.S.X.
0.5072.40.95Ta.18426.1.S1_atCA636348--4e+0At1g67760ATP binding / protein binding / unfolded protein bindingO.I.H.G.S.X.
0.3956.10.95Ta.24652.1.S1_atBT009053.1--2e-27At4g17300NS1O.I.H.G.S.X.
0.3651.90.95Ta.7493.1.S1_atCK205703--2e+0At3g53050galactose-binding lectin family proteinO.I.H.G.S.X.
0.3549.80.95Ta.17034.1.S1_s_atCA616897--3e+0At2g28870unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.399.5GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.099.3GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
9.299.0GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
8.498.9GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.698.3GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage