Co-expression analysis

Gene ID	Ta.9685.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g05520: F-actin capping protein alpha subunit family protein (HF=7e-1)
Module size	8 genes
NF	0.27
%ile	45.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	83.6	0.95	Ta.9685.1.S1_at	BJ226436	-	-	7e-1	At3g05520	F-actin capping protein alpha subunit family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.5793.1.A1_a_at	CD895981	-	-	4e-11	At5g55230	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.4744.1.S1_a_at	BJ270946	-	-	5e-7	At3g55020	RabGAP/TBC domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.7685.1.A1_at	CK166088	-	-	1e-63	At4g16340	SPK1 (SPIKE1)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	Ta.16659.1.S1_at	CA601941	-	-	8e+0	At5g40980	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.95	Ta.26345.1.A1_at	CK197721	-	-	1e-7	At3g52115	ATGR1 (ARABIDOPSIS THALIANA GAMMA RESPONSE GENE 1)	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.96	Ta.28824.1.S1_at	BJ251117	-	-	2e-15	At1g21190	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.97	Ta.431.2.A1_x_at	BJ296777	-	-	8e-8	At5g43010	RPT4A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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