Co-expression analysis

Gene ID	Ta.9642.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At4g16360: AMP-activated protein kinase (HF=4e+0)
Module size	8 genes
NF	0.47
%ile	73.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.96	Ta.9642.2.S1_a_at	CA662794	-	-	4e+0	At4g16360	AMP-activated protein kinase	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.9486.1.S1_a_at	CA613597	-	-	4e-13	At2g18750	calmodulin-binding protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.13635.2.S1_a_at	CA499433	-	-	1e-11	At1g55270	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.13635.2.S1_at	CA499433	-	-	1e-11	At1g55270	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.13635.1.A1_at	BQ171953	-	-	3e-1	At1g55270	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.97	TaAffx.30725.1.S1_s_at	CA622632	-	-	1e+0	At1g03170	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	Ta.11338.1.S1_at	BQ169872	-	-	3e+0	At4g08593	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.97	Ta.18508.1.S1_a_at	CA652261	-	-	4e-1	At4g37470	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.9	99.0	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.5	92.5	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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