Co-expression analysis

Gene ID	Ta.9619.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g48860: unknown protein (HF=8e-10)
Module size	6 genes
NF	0.12
%ile	24.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.97	Ta.9619.1.S1_a_at	CD908424	-	-	8e-10	At3g48860	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	TaAffx.65308.1.A1_s_at	BJ251595	-	-	6e-1	At1g72820	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.97	TaAffx.118944.1.S1_at	CD923245	-	-	4e-1	At5g51720	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.97	TaAffx.112617.1.S1_at	CA727349	-	-	2e-13	At5g22370	QQT1 (QUATRE-QUART 1)	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.97	Ta.9442.1.S1_at	CK194226	-	-	9e-1	At2g04520	eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.97	Ta.14606.1.S1_at	CA501669	-	-	5e-37	At4g05420	DDB1A (DAMAGED DNA BINDING PROTEIN 1A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	97.9	GSM324494	Si+ B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.5	97.8	GSM246387	SB169_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
4.8	97.2	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM298054	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM246395	SB69_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.4	95.2	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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