Co-expression analysis

Gene ID Ta.9565.3.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g63135: unknown protein (HF=1e+0)
Module size 14 genes
NF 0.30
%ile 48.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8493.60.96Ta.9565.3.S1_a_atCA661657--1e+0At5g63135unknown proteinO.I.H.G.S.X.
0.5072.40.97Ta.9591.1.S1_x_atCK197519--6e-10At5g64130-O.I.H.G.S.X.
0.4058.40.97Ta.5057.1.S1_x_atX89826.1profilin-2e-8At4g29350PFN2 (PROFILIN 2)O.I.H.G.S.X.
0.3651.90.98Ta.13231.1.S1_atBJ286554vacuolar proton ATPase subunit E-7e-35At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)O.I.H.G.S.X.
0.3346.90.98Ta.1892.1.S1_atCK163495Vacuolar ATPase subunit G-2e-6At4g23710VAG2O.I.H.G.S.X.
0.2939.20.98Ta.1474.1.S1_x_atCK167009--7e-28At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)O.I.H.G.S.X.
0.2839.20.97Ta.28304.1.S1_x_atBE430114--5e-3At3g48140senescence-associated protein, putativeO.I.H.G.S.X.
0.2633.60.97Ta.9540.2.S1_a_atBJ315174--1e-9At2g25310carbohydrate bindingO.I.H.G.S.X.
0.2633.60.98Ta.2505.1.A1_atBJ261362--2e-33At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.2227.10.98Ta.2505.1.A1_x_atBJ261362--2e-33At5g53300UBC10 (ubiquitin-conjugating enzyme 10)O.I.H.G.S.X.
0.2024.00.97TaAffx.97723.1.A1_s_atCA722761--5e-15At5g20570RBX1 (RING-BOX 1)O.I.H.G.S.X.
0.1922.40.97Ta.22762.3.S1_a_atCA614703steroid membrane binding protein-like-2e-16At3g48890ATMP2O.I.H.G.S.X.
0.1821.00.98Ta.9049.3.S1_a_atCA611142--1e+0At4g20520RNA binding / RNA-directed DNA polymeraseO.I.H.G.S.X.
0.1719.80.97TaAffx.114422.1.S1_atCA646541--5e+0At5g09960unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.199.3GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.998.7GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.898.7GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.996.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.595.4GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
3.395.0GSM250912TcLr34_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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