Co-expression analysis

Gene ID	Ta.9549.3.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g40570: surfeit locus protein 2 family protein / SURF2 family protein (HF=1e+0)
Module size	6 genes
NF	0.63
%ile	88.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.9549.3.S1_x_at	BJ229242	-	-	1e+0	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	Ta.9549.1.S1_x_at	CD938416	-	-	4e-37	At3g57150	NAP57 (Arabidopsis thaliana homologue of NAP57)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.9549.2.S1_s_at	BQ743523	-	-	1e+0	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.98	Ta.28770.2.S1_at	CA705641	-	-	6e-15	At5g52470	FIB1 (FIBRILLARIN 1)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.3753.1.S1_at	BJ247323	-	-	2e+1	At5g65220	ribosomal protein L29 family protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.9201.3.S1_at	CA603340	-	-	1e-4	At1g56110	NOP56 (Arabidopsis homolog of nucleolar protein Nop56)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.0	99.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.7	98.7	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.2	98.1	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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