Co-expression analysis

Gene ID Ta.9411.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g16810: unknown protein (HF=1e-4)
Module size 6 genes
NF 0.65
%ile 89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.98Ta.9411.2.S1_x_atCK156676--1e-4At1g16810unknown proteinO.I.H.G.S.X.
0.8393.40.98Ta.9411.3.S1_x_atCA499635--2e-4At1g16810unknown proteinO.I.H.G.S.X.
0.6786.30.99Ta.9411.1.S1_a_atBQ161375--5e-4At1g16810unknown proteinO.I.H.G.S.X.
0.6786.30.99Ta.9411.1.S1_x_atBQ161375--5e-4At1g16810unknown proteinO.I.H.G.S.X.
0.3651.90.98Ta.6936.3.S1_x_atBE445451--1e-9At1g61700DNA-directed RNA polymerase II, putative (RPB10)O.I.H.G.S.X.
0.2735.60.98Ta.6936.2.S1_x_atCK207652--2e-9At1g61700DNA-directed RNA polymerase II, putative (RPB10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.5GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.893.6GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.391.5GSM111187genotype B68 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.391.5GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.391.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.291.0GSM138213genotype C10 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.291.0GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.291.0GSM138211genotype B65 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.291.0GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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