Co-expression analysis

Gene ID	Ta.9411.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g16810: unknown protein (HF=5e-4)
Module size	6 genes
NF	0.65
%ile	89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.99	Ta.9411.1.S1_x_at	BQ161375	-	-	5e-4	At1g16810	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.98	Ta.9411.2.S1_x_at	CK156676	-	-	1e-4	At1g16810	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.98	Ta.9411.3.S1_x_at	CA499635	-	-	2e-4	At1g16810	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.99	Ta.9411.1.S1_a_at	BQ161375	-	-	5e-4	At1g16810	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.98	Ta.6936.3.S1_x_at	BE445451	-	-	1e-9	At1g61700	DNA-directed RNA polymerase II, putative (RPB10)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.6936.2.S1_x_at	CK207652	-	-	2e-9	At1g61700	DNA-directed RNA polymerase II, putative (RPB10)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.5	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM138213	genotype C10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.2	91.0	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.2	91.0	GSM138211	genotype B65 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.2	91.0	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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