Co-expression analysis

Gene ID Ta.9385.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g15520: PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) (HF=2e-26)
Module size 21 genes
NF 0.75
%ile 95.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8794.20.88Ta.9385.3.S1_atBJ316701--2e-26At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.8493.60.87Ta.8970.1.A1_x_atBQ162706--5e-2At5g03170FLA11O.I.H.G.S.X.
0.8493.60.87Ta.22602.2.S1_x_atCA641674--1e+0At3g01420DOX1O.I.H.G.S.X.
0.8493.60.89TaAffx.8019.1.S1_atCA639677--7e-2At3g05950germin-like protein, putativeO.I.H.G.S.X.
0.8192.40.91TaAffx.95097.1.S1_x_atCA695080--1e+0At2g01554unknown proteinO.I.H.G.S.X.
0.8092.20.92Ta.8483.1.S1_atBQ161963--6e+0At5g26330plastocyanin-like domain-containing protein / mavicyanin, putativeO.I.H.G.S.X.
0.7891.10.86Ta.8970.1.A1_s_atBQ162706--5e-2At5g03170FLA11O.I.H.G.S.X.
0.7790.80.90Ta.3119.1.S1_atBQ744001--2e+0At5g20540ATBRXL4 (BREVIS RADIX-LIKE 4)O.I.H.G.S.X.
0.7690.10.89TaAffx.122315.1.S1_atCA691698--3e-1At1g53760unknown proteinO.I.H.G.S.X.
0.7489.40.87TaAffx.50046.1.S1_atCA746057--7e+0At5g35360CAC2O.I.H.G.S.X.
0.7389.10.89Ta.25774.1.S1_atCD373859--5e+0At5g50790nodulin MtN3 family proteinO.I.H.G.S.X.
0.7288.30.87TaAffx.55592.2.A1_atCA735444--1e-1At5g45760transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.7087.20.88Ta.8292.1.A1_atBQ161703--7e-5At1g71695peroxidase 12 (PER12) (P12) (PRXR6)O.I.H.G.S.X.
0.6886.50.89TaAffx.80179.1.S1_atCA700373--1e+0At2g37000TCP family transcription factor, putativeO.I.H.G.S.X.
0.6886.50.89Ta.5155.1.S1_atCA638908--6e+0At5g48530unknown proteinO.I.H.G.S.X.
0.6886.50.86TaAffx.121334.1.S1_atBG904284--1e-1At4g21640subtilase family proteinO.I.H.G.S.X.
0.6886.50.84TaAffx.9160.1.S1_atCA604803--2e-1At3g28899unknown proteinO.I.H.G.S.X.
0.6786.30.87TaAffx.64649.1.S1_atBJ278430--4e+0At1g64230ubiquitin-conjugating enzyme, putativeO.I.H.G.S.X.
0.6786.30.88Ta.26151.1.A1_atCA604082--5e-1At1g73470unknown proteinO.I.H.G.S.X.
0.6684.10.90Ta.9423.1.A1_atCK193717--5e+0At5g53040RWP-RK domain-containing proteinO.I.H.G.S.X.
0.6583.90.87TaAffx.105621.1.S1_atCA731813--4e+0At5g58782dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.299.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
12.899.4GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
10.599.2GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.898.4GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.795.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.495.2GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM250894TcLr34_3dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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