Co-expression analysis

Gene ID Ta.9344.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g27440: GUT2 (HF=1e-12)
Module size 6 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.00.97Ta.9344.1.S1_atCD917189--1e-12At1g27440GUT2O.I.H.G.S.X.
0.7790.80.96Ta.1839.1.S1_x_atCA603626fasciclin-like protein FLA26-2e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.H.G.S.X.
0.7188.00.96Ta.1839.1.S1_atCA603626fasciclin-like protein FLA26-2e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.H.G.S.X.
0.6786.30.96Ta.11921.1.S1_atCA722130--6e-1At2g45380-O.I.H.G.S.X.
0.3651.90.96Ta.4447.2.S1_x_atCA607764--2e-25At4g32410CESA1 (CELLULOSE SYNTHASE 1)O.I.H.G.S.X.
0.3244.40.96Ta.9440.1.S1_atBJ283686--8e+0At4g27900-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.899.8GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.498.2GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.6358.1.S1_at, orthologous to the query gene, Ta.9344.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.6Zm.6358.1.S1_atAt1g27440hypothetical protein LOC100273975 /// hypothetical protein LOC100274514-5e-18At5g61840GUT1O.I.H.G.S.X.
0.4861.3Zm.12428.2.A1_atAt1g27440--4e+0At3g21000unknown proteinO.I.H.G.S.X.
0.4658.4Zm.1439.1.A1_atAt1g27440ZIM motif family protein-4e-2At4g05070unknown proteinO.I.H.G.S.X.
0.4455.7Zm.8044.1.S1_atAt1g27440hypothetical protein LOC100276682-6e-1At1g06060RanBPM-relatedO.I.H.G.S.X.
0.4048.5Zm.16794.1.A1_atAt1g27440isopentenyl pyrophosphate isomerase-7e-35At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.3945.6Zm.4585.1.A1_atAt1g27440hypothetical protein LOC100279421-2e-3At3g09000proline-rich family proteinO.I.H.G.S.X.
0.3844.2Zm.14429.4.A1_atAt1g27440RALF-6e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.3641.3Zm.326.1.S1_atAt1g27440response regulator 7-3e+0At5g41761unknown proteinO.I.H.G.S.X.
0.3437.2Zm.15177.1.A1_atAt1g27440--5e+0At5g45010ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)O.I.H.G.S.X.
0.3336.0Zm.19160.1.S1_atAt1g27440thioredoxin-like protein 1-6e-7At3g04780-O.I.H.G.S.X.
0.3029.8Zm.318.2.S1_a_atAt1g27440phosphate/phosphoenolpyruvate translocator precursor-5e-8At5g33320CUE1 (CAB UNDEREXPRESSED 1)O.I.H.G.S.X.
0.3029.8Zm.16421.1.A1_atAt1g27440--4e+0At5g66970GTP bindingO.I.H.G.S.X.
0.3029.8Zm.16804.1.S1_atAt1g2744050S ribosomal protein L17-2e-6At5g09770ribosomal protein L17 family proteinO.I.H.G.S.X.
0.2828.1Zm.1806.1.A1_atAt1g27440--3e-1At5g44900transmembrane receptorO.I.H.G.S.X.
0.2828.1Zm.4182.1.S1_atAt1g27440hypothetical protein LOC100276027-1e-4At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.2828.1Zm.17197.1.A1_atAt1g27440DNA binding protein-3e-3At3g51960bZIP family transcription factorO.I.H.G.S.X.
0.2622.7Zm.18516.1.A1_atAt1g27440--2e+0At5g55570unknown proteinO.I.H.G.S.X.
0.2622.7Zm.4965.1.A1_atAt1g27440cyclase/dehydrase family protein-2e-1At5g46790unknown proteinO.I.H.G.S.X.
0.2622.7Zm.14076.2.A1_a_atAt1g27440hypothetical protein LOC100279817-9e-2At5g27450MK (MEVALONATE KINASE)O.I.H.G.S.X.
0.2521.3Zm.13744.1.S1_atAt1g27440guanine nucleotide-binding protein alpha-1 subunit-2e-14At2g26300GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1)O.I.H.G.S.X.
0.2318.6Zm.10280.1.S1_atAt1g27440hypothetical protein LOC100216803-5e-2At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.2216.9Zm.4271.2.S1_a_atAt1g27440hypothetical protein LOC100193437-2e-20At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.2216.9Zm.10371.1.A1_atAt1g27440low phytic acid 1-9e-15At1g04120ATMRP5O.I.H.G.S.X.
0.2014.2Zm.9749.1.S1_a_atAt1g27440--3e+0At1g02850BGLU11 (BETA GLUCOSIDASE 11)O.I.H.G.S.X.
0.2014.2Zm.5947.1.A1_atAt1g27440--3e+0At2g16490XH domain-containing proteinO.I.H.G.S.X.
0.1912.8Zm.12236.1.A1_atAt1g27440hypothetical protein LOC100194199-5e+0At3g13970APG12B (AUTOPHAGY 12 B)O.I.H.G.S.X.
0.1710.6Zm.6555.1.A1_atAt1g27440--3e+0At5g22880HTB2O.I.H.G.S.X.
0.115.3Zm.13763.1.A1_atAt1g27440hypothetical protein LOC100279845-2e-4At4g386901-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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