Co-expression analysis

Gene ID Ta.9344.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g27440: GUT2 (HF=1e-12)
Module size 6 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.00.97Ta.9344.1.S1_atCD917189--1e-12At1g27440GUT2O.I.H.G.S.X.
0.7790.80.96Ta.1839.1.S1_x_atCA603626fasciclin-like protein FLA26-2e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.H.G.S.X.
0.7188.00.96Ta.1839.1.S1_atCA603626fasciclin-like protein FLA26-2e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.H.G.S.X.
0.6786.30.96Ta.11921.1.S1_atCA722130--6e-1At2g45380-O.I.H.G.S.X.
0.3651.90.96Ta.4447.2.S1_x_atCA607764--2e-25At4g32410CESA1 (CELLULOSE SYNTHASE 1)O.I.H.G.S.X.
0.3244.40.96Ta.9440.1.S1_atBJ283686--8e+0At4g27900-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.899.8GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.498.2GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.2745.1.S1_at, orthologous to the query gene, Ta.9344.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6GmaAffx.2745.1.S1_atAt1g27440--5e-61At5g61840GUT1O.I.H.G.S.X.
0.7790.3Gma.9086.2.S1_atAt1g27440--5e-34At4g18780IRX1 (IRREGULAR XYLEM 1)O.I.H.G.S.X.
0.7790.3Gma.6081.1.S1_atAt1g27440--5e-5At1g05850POM1 (POM-POM1)O.I.H.G.S.X.
0.7388.9Gma.12211.2.S1_atAt1g27440--2e-24At5g15630IRX6O.I.H.G.S.X.
0.7388.9GmaAffx.55959.1.S1_atAt1g27440--5e-31At5g54690GAUT12 (GALACTURONOSYLTRANSFERASE 12)O.I.H.G.S.X.
0.6181.8GmaAffx.2745.2.A1_atAt1g27440--3e-3At5g61840GUT1O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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