Co-expression analysis

Gene ID	Ta.9324.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g36290: unknown protein (HF=4e-4)
Module size	37 genes
NF	0.18
%ile	31.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.99	100.0	0.95	Ta.9324.2.S1_a_at	CA659465	-	-	4e-4	At5g36290	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	Ta.25423.1.S1_at	CD374054	-	-	2e+0	At3g14480	glycine/proline-rich protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.97	TaAffx.84726.1.S1_x_at	CA630343	-	-	2e+1	At2g12170	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.1026.1.S1_a_at	CA693360	-	-	7e-22	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select
0.26	33.6	0.96	Ta.2408.2.S1_a_at	CA644611	-	-	1e+0	At1g53890	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.97	Ta.1043.1.S1_at	CK167660	-	-	2e-4	At3g52800	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.97	Ta.1026.3.S1_x_at	CA700666	-	-	4e-26	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.96	TaAffx.119172.1.A1_at	BJ285444	-	-	1e+0	At4g23895	pleckstrin homology (PH) domain-containing protein-related	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.97	Ta.9230.1.S1_x_at	BQ169651	-	-	5e-1	At4g32030	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.97	Ta.14605.1.S1_at	BQ838001	-	-	3e-1	At5g64160	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.98	Ta.23107.3.S1_x_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.98	Ta.2682.1.A1_at	BJ274792	-	-	1e-26	At2g36060	ubiquitin-conjugating enzyme family protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.97	Ta.6675.1.S1_at	BJ309619	P34cdc2	-	3e-12	At3g48750	CDC2 (CELL DIVISION CONTROL 2)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.97	Ta.9230.1.S1_at	BQ169651	-	-	5e-1	At4g32030	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.98	Ta.23107.3.S1_a_at	CA655366	-	-	1e-28	At3g46060	ATRAB8A	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.97	Ta.13248.1.S1_at	BE430584	-	-	1e-2	At4g32960	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.95	Ta.28013.1.S1_x_at	CA612607	-	-	2e-3	At4g13100	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.98	Ta.1962.1.A1_at	BJ219344	-	-	1e-1	At3g01600	anac044 (Arabidopsis NAC domain containing protein 44)	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.97	Ta.11159.3.S1_a_at	CA640659	-	-	7e-2	At1g65270	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.97	TaAffx.131233.1.S1_x_at	CK196231	-	-	2e+0	At4g29590	methyltransferase	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.97	Ta.21086.1.S1_a_at	CD864763	-	-	4e-38	At2g20930	-	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.97	Ta.14345.1.S1_at	BU101234	-	-	7e+0	At2g40802	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.98	Ta.9176.1.S1_at	BJ218541	-	-	7e-47	At1g02130	ARA-5 (ARABIDOPSIS RAS 5)	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.97	Ta.20990.1.S1_a_at	BJ286588	-	-	6e+0	At4g33180	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.98	Ta.3309.1.S1_s_at	CA602533	-	-	3e-11	At5g47570	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.97	Ta.10983.1.S1_a_at	BQ166964	-	-	3e+0	At3g53530	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.96	Ta.6328.1.S1_at	BJ302263	-	-	1e-2	At4g27880	seven in absentia (SINA) family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.96	Ta.23194.2.S1_a_at	CA614403	-	-	1e+0	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.97	Ta.11580.1.S1_at	BQ170395	-	-	8e+0	At4g34215	hydrolase	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.98	Ta.25017.1.S1_at	CD901339	-	-	4e-21	At5g16050	GRF5 (GENERAL REGULATORY FACTOR 5)	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.97	Ta.4625.2.S1_at	CA642045	-	-	4e-22	At2g39630	glycosyl transferase family 2 protein	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.97	Ta.10250.1.A1_a_at	CD452858	-	-	6e-1	At2g30590	WRKY21	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.98	Ta.50.1.S1_at	BJ307738	TaWIN1 protein	-	1e-24	At3g02520	GRF7 (GENERAL REGULATORY FACTOR 7)	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.97	Ta.4245.1.S1_at	CA614869	-	-	2e-22	At4g30260	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.97	Ta.2210.1.S1_at	BJ285596	-	-	7e-16	At5g21070	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.97	Ta.13955.1.A1_at	BQ752694	-	-	4e-14	At4g03340	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.97	Ta.8167.2.S1_s_at	BF200226	-	-	4e-1	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	98.4	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
6.1	98.1	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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