Co-expression analysis

Gene ID Ta.9290.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g14455: unknown protein (HF=8e-1)
Module size 6 genes
NF 0.21
%ile 35.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.92Ta.9290.1.S1_atCD865398--8e-1At1g14455unknown proteinO.I.H.G.S.X.
0.7389.10.94Ta.9290.1.S1_x_atCD865398--8e-1At1g14455unknown proteinO.I.H.G.S.X.
0.5779.20.94Ta.9290.3.S1_x_atCA501890--9e-2At5g57790unknown proteinO.I.H.G.S.X.
0.1821.00.96Ta.27319.1.S1_atBT009349.1--2e-57At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)O.I.H.G.S.X.
0.1719.80.96TaAffx.102859.1.S1_atCA647205--3e-1At5g40250zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.045.80.96Ta.1058.3.S1_x_atCN013117S-adenosylmethionine decarboxylase precursor-8e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.099.3GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
11.099.3GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
10.999.3GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
8.398.8GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.598.3GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.298.1GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.497.7GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.391.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.089.7GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1614610_at, orthologous to the query gene, Ta.9290.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81614610_atAt1g14455--9e+0Atcg00740-O.I.H.G.S.X.
0.3345.71617652_s_atAt1g14455hypothetical protein LOC100249964-3e-2At3g63310glutamate bindingO.I.H.G.S.X.
0.2734.01607450_atAt1g14455hypothetical protein LOC100264463-1e+0At5g11070unknown proteinO.I.H.G.S.X.
0.2530.51618109_atAt1g14455--2e-11At3g54170ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37)O.I.H.G.S.X.
0.1718.21611308_atAt1g14455hypothetical protein LOC100248182-6e-4At3g47810MAG1 (MAIGO 1)O.I.H.G.S.X.
0.088.51612087_atAt1g14455--2e+0At2g28140unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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