Co-expression analysis

Gene ID Ta.9288.3.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g21770: peroxidase 30 (PER30) (P30) (PRXR9) (HF=4e-3)
Module size 6 genes
NF 0.91
%ile 99.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.95Ta.9288.3.S1_x_atBJ256761--4e-3At3g21770peroxidase 30 (PER30) (P30) (PRXR9)O.I.H.G.S.X.
0.9198.20.95Ta.4180.1.S1_atBJ260325--6e+0At3g22820allergen-relatedO.I.H.G.S.X.
0.9198.20.95Ta.4180.1.S1_x_atBJ260325--6e+0At3g22820allergen-relatedO.I.H.G.S.X.
0.7790.80.95Ta.9288.1.S1_x_atCK152619--1e-2At5g42180peroxidase 64 (PER64) (P64) (PRXR4)O.I.H.G.S.X.
0.7790.80.95Ta.9288.2.S1_x_atCA608439--1e-3At5g15180peroxidase, putativeO.I.H.G.S.X.
0.7389.10.96TaAffx.86697.1.S1_x_atCA602476--2e+0At5g57300UbiE/COQ5 methyltransferase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.299.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
29.399.8GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
24.599.8GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
22.299.8GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
21.999.8GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
19.999.7GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
19.699.7GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
12.099.4GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.896.0GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314267tissue type: seedling, leaf - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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