Co-expression analysis

Gene ID	Ta.9251.2.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g00810: 60S acidic ribosomal protein P1 (RPP1B) (HF=3e-2)
Module size	6 genes
NF	0.17
%ile	30.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.88	Ta.9251.2.A1_x_at	CA606965	-	-	3e-2	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.83	Ta.9251.2.A1_at	CA606965	-	-	3e-2	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.88	Ta.12715.1.S1_s_at	BM134770	-	-	3e-2	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.88	Ta.9251.1.S1_x_at	BQ162667	-	-	9e+0	At3g25719	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.84	Ta.7046.2.A1_at	BJ253526	-	-	8e-1	At4g39540	shikimate kinase family protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.83	TaAffx.128570.1.S1_at	CK217819	-	-	2e-1	At1g61360	S-locus lectin protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	98.4	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
6.5	98.3	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.5	97.8	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.5	96.9	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM111144	genotype AC Domain developing seed at 5 days after anthesis, biological rep1	GSE4929	wheat expression level polymorphism study parental genotypes 2 biological reps
4.0	96.3	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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