Co-expression analysis

Gene ID	Ta.9211.2.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g23170: EP1 (HF=5e+0)
Module size	6 genes
NF	0.56
%ile	82.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.9211.2.A1_x_at	CD879802	-	-	5e+0	At4g23170	EP1	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.9211.2.A1_a_at	CD879802	-	-	5e+0	At4g23170	EP1	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.14589.1.S1_at	BJ321559	-	-	3e-106	At5g49460	ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.9211.2.A1_at	CD879802	-	-	5e+0	At4g23170	EP1	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.96	Ta.9211.3.S1_x_at	CA614768	-	-	5e-6	At2g20810	GAUT10 (GALACTURONOSYLTRANSFERASE 10)	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.97	Ta.14073.1.S1_x_at	BJ228415	-	-	5e-36	At1g09430	ACLA-3	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.0	99.3	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.6	99.2	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.0	94.3	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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