Co-expression analysis

Gene ID	Ta.9196.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g08290: YLS8 (HF=9e-64)
Module size	6 genes
NF	0.68
%ile	91.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.96	Ta.9196.1.S1_at	CD919411	-	-	9e-64	At5g08290	YLS8	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.96	Ta.9196.1.S1_x_at	CD919411	-	-	9e-64	At5g08290	YLS8	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.95	Ta.1274.1.S1_x_at	CK194462	-	-	3e+0	At1g30070	SGS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.96	Ta.1274.1.S1_a_at	CK194462	-	-	3e+0	At1g30060	COP1-interacting protein-related	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	Ta.10799.1.S1_at	BQ800953	-	-	5e-24	At5g15400	U-box domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.19530.1.A1_at	BJ308204	-	-	3e-1	At1g55950	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.3	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9	94.0	GSM111201	genotype D39 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.8	93.6	GSM111186	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.8	93.6	GSM111224	genotype A81 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6	92.9	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.5	92.5	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.2	91.0	GSM111225	genotype A81 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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