Co-expression analysis

Gene ID	Ta.9117.3.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g49700: DNA-binding protein-related (HF=4e-3)
Module size	8 genes
NF	0.39
%ile	62.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.94	Ta.9117.3.A1_x_at	BJ230809	-	-	4e-3	At5g49700	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.96	Ta.9117.1.A1_a_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.10082.3.A1_s_at	BJ261535	-	-	7e-2	At1g80245	-	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.97	Ta.6784.1.S1_at	CK151755	-	-	6e-85	At1g21690	emb1968 (embryo defective 1968)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.9117.1.A1_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.2745.3.A1_at	BJ320799	-	-	1e+0	At5g33370	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.97	TaAffx.33515.1.A1_at	BJ257051	-	-	4e-1	At3g52380	CP33	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.97	Ta.22374.1.A1_at	CA741771	-	-	1e+0	At2g38600	acid phosphatase class B family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.3	99.6	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
14.2	99.5	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
12.5	99.4	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9	96.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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