Co-expression analysis

Gene ID	Ta.9117.1.A1_a_at
Gene name
Homology with Arabidopsis	Similar to At1g51010: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.17
%ile	30.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.96	Ta.9117.1.A1_a_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	Ta.9117.3.A1_x_at	BJ230809	-	-	4e-3	At5g49700	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	Ta.29457.1.S1_at	CK205969	-	-	1e-18	At4g30020	subtilase family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.9117.1.A1_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.96	Ta.29552.1.S1_x_at	BE446813	-	-	6e-1	At1g18650	PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.96	TaAffx.33515.1.A1_at	BJ257051	-	-	4e-1	At3g52380	CP33	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3	96.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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