Co-expression analysis

Gene ID	Ta.9086.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g44940: AP2 domain-containing transcription factor TINY, putative (HF=2e+0)
Module size	6 genes
NF	0.62
%ile	87.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.9086.1.S1_at	CD866759	-	-	2e+0	At2g44940	AP2 domain-containing transcription factor TINY, putative	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.324.2.S1_x_at	BQ238537	-	-	2e-2	At3g50670	U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.98	Ta.23800.1.S1_at	CA647644	-	-	3e-4	At1g05910	cell division cycle protein 48-related / CDC48-related	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.98	Ta.7537.1.S1_at	CK199057	-	-	7e-5	At2g16940	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.7312.1.S1_at	AY217752.1	-	-	1e-3	At3g63400	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.9802.1.A1_at	BJ232036	-	-	1e+0	At1g23050	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	97.1	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM314268	tissue type: seedling, leaf - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.7	93.3	GSM138201	genotype F48 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.6	92.9	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.4	92.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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