Co-expression analysis

Gene ID Ta.905.2.S1_at
Gene name avenin-like a precursor-like
Homology with ArabidopsisSimilar to At5g18400: unknown protein (HF=7e+0)
Module size 6 genes
NF 0.86
%ile 98.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.41.00Ta.905.2.S1_atBQ804326avenin-like a precursor-like-7e+0At5g18400unknown proteinO.I.H.G.S.X.
0.9198.21.00Ta.2446.1.S1_atCD900024--2e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.8393.41.00Ta.23798.1.S1_atBQ804549CM 17 protein precursor-1e-1At5g25940early nodulin-relatedO.I.H.G.S.X.
0.8092.21.00Ta.2446.1.S1_x_atCD900024--2e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.6786.31.00Ta.28312.2.S1_x_atBQ804999--9e+0At5g22180unknown proteinO.I.H.G.S.X.
0.6786.31.00Ta.2446.1.S1_a_atCD900024precursor protein (AA -25 to 120)-2e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
66.7100.0GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
64.399.9GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
62.699.9GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
18.599.7GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
16.799.6GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
14.999.5GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.898.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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