Co-expression analysis

Gene ID	Ta.8884.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g23680: F-box family protein-related (HF=3e-1)
Module size	6 genes
NF	0.12
%ile	24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.81	Ta.8884.1.A1_at	BQ162561	-	-	3e-1	At3g23680	F-box family protein-related	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.80	TaAffx.57044.1.S1_at	CA637731	-	-	1e+1	At1g32480	oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.77	TaAffx.32023.1.S1_x_at	CA602750	-	-	1e+1	At5g47570	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.82	Ta.9334.2.S1_at	CA608488	-	-	1e+0	At4g30064	LCR61 (Low-molecular-weight cysteine-rich 61)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.79	TaAffx.98797.3.S1_at	CA639155	-	-	4e-2	At4g16750	DRE-binding transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.83	Ta.7279.1.S1_at	CK152216	-	-	1e+1	At2g47400	CP12-1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.4	99.8	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
19.0	99.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
13.8	99.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
10.9	99.3	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
10.6	99.2	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
9.5	99.1	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.2	98.5	GSM111243	genotype C10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
7.0	98.5	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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