Co-expression analysis

Gene ID Ta.8884.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g23680: F-box family protein-related (HF=3e-1)
Module size 6 genes
NF 0.12
%ile 24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.81Ta.8884.1.A1_atBQ162561--3e-1At3g23680F-box family protein-relatedO.I.H.G.S.X.
0.3346.90.80TaAffx.57044.1.S1_atCA637731--1e+1At1g32480oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptorO.I.H.G.S.X.
0.3244.40.77TaAffx.32023.1.S1_x_atCA602750--1e+1At5g47570unknown proteinO.I.H.G.S.X.
0.2227.10.82Ta.9334.2.S1_atCA608488--1e+0At4g30064LCR61 (Low-molecular-weight cysteine-rich 61)O.I.H.G.S.X.
0.067.60.79TaAffx.98797.3.S1_atCA639155--4e-2At4g16750DRE-binding transcription factor, putativeO.I.H.G.S.X.
0.034.70.83Ta.7279.1.S1_atCK152216--1e+1At2g47400CP12-1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.499.8GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
19.099.7GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
13.899.5GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
10.999.3GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
10.699.2GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
9.599.1GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.298.5GSM111243genotype C10 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
7.098.5GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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