Co-expression analysis

Gene ID	Ta.885.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g27810: sequence-specific DNA binding / transcription factor (HF=1e+1)
Module size	6 genes
NF	0.73
%ile	94.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	1.00	Ta.885.1.S1_at	BJ238471	-	-	1e+1	At5g27810	sequence-specific DNA binding / transcription factor	O.I.	H.G.	S.X.	Please select
0.83	93.4	1.00	Ta.1549.1.S1_at	BJ242539	-	-	6e-2	At1g11910	aspartyl protease family protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	1.00	Ta.58.1.S1_at	BJ239121	major allergen CM16 /// CM16 protein	-	3e+1	At5g06250	transcription factor	O.I.	H.G.	S.X.	Please select
0.77	90.8	1.00	Ta.23967.1.S1_s_at	CD900389	alpha1 purothionin /// alpha2 purothionin /// beta purothionin precursor	-	1e+0	At4g22370	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	1.00	Ta.23798.1.S1_s_at	BQ804549	CM16 protein /// CM 17 protein precursor	-	1e-1	At5g25940	early nodulin-related	O.I.	H.G.	S.X.	Please select
0.25	32.1	1.00	Ta.23967.1.S1_x_at	CD900389	alpha2 purothionin	-	1e+0	At4g22370	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
44.4	99.9	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
40.5	99.9	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
38.5	99.9	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
25.8	99.8	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
13.7	99.5	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
11.0	99.3	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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