Co-expression analysis

Gene ID Ta.8841.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At3g12250: TGA6 (TGACG MOTIF-BINDING FACTOR 6) (HF=3e-1)
Module size 9 genes
NF 0.72
%ile 93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7690.10.85Ta.8841.2.S1_a_atCA640387--3e-1At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.8894.40.90TaAffx.63920.1.A1_atBQ162587--2e+0At2g02880mucin-relatedO.I.H.G.S.X.
0.8894.40.92TaAffx.63920.1.A1_x_atBQ162587--2e+0At2g02880mucin-relatedO.I.H.G.S.X.
0.7589.80.93Ta.8896.2.S1_a_atCA639810--1e-1At1g15970methyladenine glycosylase family proteinO.I.H.G.S.X.
0.7087.20.91Ta.25946.1.A1_atCD454681--5e+0At5g44585unknown proteinO.I.H.G.S.X.
0.6786.30.94Ta.8896.1.S1_x_atCK153405--1e-1At1g15970methyladenine glycosylase family proteinO.I.H.G.S.X.
0.6383.10.93Ta.8896.2.S1_x_atCA639810--1e-1At1g15970methyladenine glycosylase family proteinO.I.H.G.S.X.
0.5979.80.91Ta.9494.1.S1_a_atCK199730--1e-8At1g53580GLY3 (GLYOXALASE II 3)O.I.H.G.S.X.
0.4260.90.92Ta.4779.1.S1_atBJ271542--9e-1At5g20920EIF2 BETAO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.999.5GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
14.799.5GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.799.5GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
13.699.5GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.499.4GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.498.9GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.496.8GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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