Co-expression analysis

Gene ID	Ta.8841.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g12250: TGA6 (TGACG MOTIF-BINDING FACTOR 6) (HF=3e-1)
Module size	9 genes
NF	0.72
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.76	90.1	0.85	Ta.8841.2.S1_a_at	CA640387	-	-	3e-1	At3g12250	TGA6 (TGACG MOTIF-BINDING FACTOR 6)	O.I.	H.G.	S.X.	Please select
0.88	94.4	0.90	TaAffx.63920.1.A1_at	BQ162587	-	-	2e+0	At2g02880	mucin-related	O.I.	H.G.	S.X.	Please select
0.88	94.4	0.92	TaAffx.63920.1.A1_x_at	BQ162587	-	-	2e+0	At2g02880	mucin-related	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.93	Ta.8896.2.S1_a_at	CA639810	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.70	87.2	0.91	Ta.25946.1.A1_at	CD454681	-	-	5e+0	At5g44585	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.8896.1.S1_x_at	CK153405	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.93	Ta.8896.2.S1_x_at	CA639810	-	-	1e-1	At1g15970	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.91	Ta.9494.1.S1_a_at	CK199730	-	-	1e-8	At1g53580	GLY3 (GLYOXALASE II 3)	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.92	Ta.4779.1.S1_at	BJ271542	-	-	9e-1	At5g20920	EIF2 BETA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.9	99.5	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
14.7	99.5	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
13.7	99.5	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
13.6	99.5	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
12.4	99.4	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
8.4	98.9	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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