Co-expression analysis

Gene ID	Ta.8631.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g67560: ATARLA1D (ADP-ribosylation factor-like A1D) (HF=8e-28)
Module size	10 genes
NF	0.48
%ile	74.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.72	88.3	0.96	Ta.8631.1.S1_at	CA690636	-	-	8e-28	At5g67560	ATARLA1D (ADP-ribosylation factor-like A1D)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.23.1.S1_at	X82148.1	Voltage dependent anion channel (VDAC)	-	6e-4	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.97	Ta.1536.1.S1_at	CD866069	-	-	9e-4	At5g08160	ATPK3	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.4648.2.S1_x_at	CD905696	-	-	3e-1	At1g72690	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.1031.1.A1_at	CK198320	-	-	3e-30	At5g11770	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.20520.1.S1_at	CA637265	-	-	3e-3	At3g62970	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.2285.1.S1_x_at	BQ901946	-	-	6e+0	At5g55010	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.5022.1.A1_x_at	BQ237823	-	-	8e-2	At2g20360	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.5022.1.A1_at	BQ237823	-	-	8e-2	At2g20360	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.2328.1.S1_at	CK217580	-	-	7e+0	At3g52730	ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.5	99.2	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
6.5	98.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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