Co-expression analysis

Gene ID Ta.8631.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g67560: ATARLA1D (ADP-ribosylation factor-like A1D) (HF=8e-28)
Module size 10 genes
NF 0.48
%ile 74.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.30.96Ta.8631.1.S1_atCA690636--8e-28At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.
0.6786.30.97Ta.23.1.S1_atX82148.1Voltage dependent anion channel (VDAC)-6e-4At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)O.I.H.G.S.X.
0.5879.20.97Ta.1536.1.S1_atCD866069--9e-4At5g08160ATPK3O.I.H.G.S.X.
0.4767.90.97Ta.4648.2.S1_x_atCD905696--3e-1At1g72690unknown proteinO.I.H.G.S.X.
0.4767.90.97Ta.1031.1.A1_atCK198320--3e-30At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.4464.50.97Ta.20520.1.S1_atCA637265--3e-3At3g62970protein binding / zinc ion bindingO.I.H.G.S.X.
0.4058.40.98Ta.2285.1.S1_x_atBQ901946--6e+0At5g55010unknown proteinO.I.H.G.S.X.
0.4058.40.98Ta.5022.1.A1_x_atBQ237823--8e-2At2g20360binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.3244.40.97Ta.5022.1.A1_atBQ237823--8e-2At2g20360binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.2939.20.97Ta.2328.1.S1_atCK217580--7e+0At3g52730ubiquinol-cytochrome C reductase UQCRX/QCR9-like family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.599.2GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.398.2GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM314264tissue type: seedling, crown - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM314263tissue type: seedling, crown - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.495.2GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage