Co-expression analysis

Gene ID Ta.8616.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g56190: ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) (HF=4e+0)
Module size 6 genes
NF 0.25
%ile 41.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.94Ta.8616.1.A1_atBQ162131--4e+0At3g56190ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)O.I.H.G.S.X.
0.3854.70.94TaAffx.52586.1.S1_atCA704954--6e+0At1g67260TCP1O.I.H.G.S.X.
0.3346.90.94Ta.9641.1.A1_a_atBJ247599--1e-3At3g52600AtcwINV2 (Arabidopsis thaliana cell wall invertase 2)O.I.H.G.S.X.
0.3040.90.94Ta.4824.1.S1_atCD885392--2e-2At4g18790NRAMP5O.I.H.G.S.X.
0.1314.60.94Ta.28847.1.S1_a_atCA740446--8e-7At4g10540subtilase family proteinO.I.H.G.S.X.
0.1213.30.95TaAffx.5634.1.S1_atBJ240434--1e+1At3g28925-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.498.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
5.297.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.197.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.296.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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