Co-expression analysis

Gene ID	Ta.8384.2.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g64590: unknown protein (HF=2e+1)
Module size	12 genes
NF	0.25
%ile	41.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.96	99.3	0.95	Ta.8384.2.A1_x_at	BJ307294	-	-	2e+1	At5g64590	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.1709.1.S1_at	CK208738	-	-	2e-53	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.8384.1.S1_at	BQ161820	-	-	2e+0	At1g16530	ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.98	Ta.12532.1.S1_at	BQ166155	-	-	2e-8	At5g52580	RAB GTPase activator	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.29595.1.A1_at	CD373725	-	-	1e+0	At5g41640	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.97	Ta.28553.13.S1_at	BJ300199	-	-	5e-138	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.96	Ta.14514.1.S1_a_at	CA666379	-	-	1e-23	At5g45130	RHA1 (RAB HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.98	Ta.12565.1.S1_at	CK205701	-	-	2e-3	At4g24690	ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.97	Ta.2830.1.S1_at	CD934919	-	-	4e-6	At3g14100	oligouridylate-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.97	Ta.384.1.S1_at	CK196813	-	-	6e-2	At1g06550	enoyl-CoA hydratase/isomerase family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.97	Ta.10888.1.S1_at	BQ166763	-	-	5e-4	At3g07790	DGCR14-related	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.97	Ta.23742.1.S1_at	CA668797	-	-	5e-66	At5g45550	mob1/phocein family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.6	99.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.5	99.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.8	98.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.9	94.0	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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