Co-expression analysis

Gene ID	Ta.8352.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g02280: synbindin, putative (HF=2e+0)
Module size	12 genes
NF	0.53
%ile	79.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.9	0.95	Ta.8352.1.S1_at	BQ161778	-	-	2e+0	At5g02280	synbindin, putative	O.I.	H.G.	S.X.	Please select
0.78	91.1	0.96	Ta.22867.1.S1_at	CK208259	-	-	2e-11	At5g57815	cytochrome c oxidase subunit 6b, putative	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.95	Ta.19555.1.S1_at	CA653351	-	-	2e-22	At1g80230	cytochrome c oxidase family protein	O.I.	H.G.	S.X.	Please select
0.62	82.3	0.95	Ta.29366.1.A1_at	CA644420	-	-	5e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	Ta.5519.1.S1_s_at	CK199483	-	-	2e-8	At2g01330	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	Ta.1253.1.S1_a_at	CK200118	-	-	1e+1	At5g63085	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.9331.1.S1_at	CA703213	-	-	7e-2	At4g29130	HXK1 (HEXOKINASE 1)	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.95	Ta.9331.1.S1_x_at	CA703213	-	-	7e-2	At4g29130	HXK1 (HEXOKINASE 1)	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.95	Ta.9625.1.S1_at	BJ236772	-	-	2e-2	At2g03110	RNA binding / nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.95	Ta.5677.1.S1_at	BJ250717	-	-	1e-40	At2g44350	ATCS	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.95	Ta.3084.1.S1_at	BQ166296	vesicle-associated membrane protein-associated protein	-	6e-1	At4g00170	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.95	Ta.5519.1.S1_x_at	CK199483	-	-	2e-8	At2g01330	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.7	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7	97.1	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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