Co-expression analysis

Gene ID Ta.822.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At4g40040: histone H3.2 (HF=1e-90)
Module size 6 genes
NF 0.51
%ile 77.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.99Ta.822.2.S1_x_atCD901100--1e-90At4g40040histone H3.2O.I.H.G.S.X.
0.6182.00.98Ta.4980.1.S1_atCK213203--9e+0At5g51990CBF4 (C- REPEAT-BINDING FACTOR 4)O.I.H.G.S.X.
0.4666.80.98Ta.28553.8.S1_x_atBJ217307ubiquitin-6e-106At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.4666.80.99Ta.21374.2.S1_atCK208435--8e-66At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)O.I.H.G.S.X.
0.3142.70.98Ta.1797.1.S1_x_atCK208870--6e-32At5g51940NRPB6AO.I.H.G.S.X.
0.2939.20.99Ta.22845.1.S1_atBJ215922tat binding protein-7e-54At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.399.5GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.498.9GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.294.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.692.9GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.492.0GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.492.0GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.190.3GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.089.7GSM138157genotype DH91 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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