Co-expression analysis

Gene ID	Ta.822.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g40040: histone H3.2 (HF=1e-90)
Module size	6 genes
NF	0.51
%ile	77.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.99	Ta.822.2.S1_x_at	CD901100	-	-	1e-90	At4g40040	histone H3.2	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.98	Ta.4980.1.S1_at	CK213203	-	-	9e+0	At5g51990	CBF4 (C- REPEAT-BINDING FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.98	Ta.28553.8.S1_x_at	BJ217307	ubiquitin	-	6e-106	At4g05050	UBQ11 (UBIQUITIN 11)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.99	Ta.21374.2.S1_at	CK208435	-	-	8e-66	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.98	Ta.1797.1.S1_x_at	CK208870	-	-	6e-32	At5g51940	NRPB6A	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.99	Ta.22845.1.S1_at	BJ215922	tat binding protein	-	7e-54	At1g09100	RPT5B (26S proteasome AAA-ATPase subunit RPT5B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.3	99.5	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.4	98.9	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.2	94.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4	92.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.1	90.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.0	89.7	GSM138157	genotype DH91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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