Co-expression analysis

Gene ID Ta.8196.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g27440: unknown protein (HF=1e+0)
Module size 25 genes
NF 0.20
%ile 35.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.92Ta.8196.2.S1_atCK211943--1e+0At5g27440unknown proteinO.I.H.G.S.X.
0.6786.30.93Ta.12366.1.S1_atBQ172196--3e-14At2g48070RPH1 (RESISTANCE TO PHYTOPHTHORA 1)O.I.H.G.S.X.
0.4058.40.94Ta.17076.2.S1_x_atBQ789183--1e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)O.I.H.G.S.X.
0.3753.00.94Ta.2167.3.S1_a_atCA647226--3e-13At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.3753.00.94TaAffx.66587.1.S1_atBG909343--2e+0At1g02620GTP-binding protein (SAR1A)O.I.H.G.S.X.
0.3651.90.94Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.3244.40.93Ta.11314.2.S1_x_atCA619157--4e+0At5g40500unknown proteinO.I.H.G.S.X.
0.2430.30.94TaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.2430.30.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.2125.50.94TaAffx.53978.1.S1_atCD872405--1e+0At5g03380heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2024.00.96Ta.5949.1.S1_x_atCD919637--6e-4At3g54660GR (GLUTATHIONE REDUCTASE)O.I.H.G.S.X.
0.2024.00.94Ta.18365.1.S1_atCA635232--7e-1At3g15790MBD11O.I.H.G.S.X.
0.1922.40.94Ta.8265.1.A1_atBQ161672--1e+0At5g23480DNA bindingO.I.H.G.S.X.
0.1821.00.96Ta.5949.1.S1_atCD919637--6e-4At3g54660GR (GLUTATHIONE REDUCTASE)O.I.H.G.S.X.
0.1719.80.94TaAffx.101361.1.S1_atCA650007--7e-1At5g58200unknown proteinO.I.H.G.S.X.
0.1618.20.95Ta.27511.1.S1_atBT009220.1--2e+0At5g23480DNA bindingO.I.H.G.S.X.
0.1517.10.94Ta.12104.1.S1_atCD939443--7e-51At5g53350CLPXO.I.H.G.S.X.
0.1415.80.93Ta.23123.1.S1_x_atCK198493--6e-5At4g35450AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2)O.I.H.G.S.X.
0.1314.60.96Ta.10182.1.S1_atBJ242478--2e+0At3g51410unknown proteinO.I.H.G.S.X.
0.1213.30.94Ta.4572.1.S1_a_atBJ268136--1e-1At1g14300bindingO.I.H.G.S.X.
0.1213.30.95TaAffx.29973.1.S1_atCA631418--2e+0At5g61410RPEO.I.H.G.S.X.
0.1213.30.95Ta.9928.1.S1_s_atBG904944--2e-2At4g10030hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.1112.40.94Ta.8613.1.A1_atBQ162128--1e+0At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.H.G.S.X.
0.1112.40.94Ta.717.1.S1_atBJ308303--3e-28At4g20360ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B)O.I.H.G.S.X.
0.1011.30.94TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.398.6GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.098.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.595.4GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.595.4GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.495.2GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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