Co-expression analysis

Gene ID Ta.8128.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g62600: ATERDJ3B (HF=4e-12)
Module size 6 genes
NF 0.52
%ile 78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.95Ta.8128.1.S1_x_atBQ161382--4e-12At3g62600ATERDJ3BO.I.H.G.S.X.
0.6786.30.96Ta.8128.2.S1_x_atCA667693--8e-2At3g62600ATERDJ3BO.I.H.G.S.X.
0.6786.30.96Ta.28735.1.S1_a_atBJ250459--5e-50At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.6786.30.97Ta.8128.2.S1_a_atCA667693--8e-2At3g62600ATERDJ3BO.I.H.G.S.X.
0.2735.60.95TaAffx.49805.1.S1_atBQ802274--5e+0At4g00070-O.I.H.G.S.X.
0.2024.00.95Ta.3942.1.S1_a_atBJ255487--3e-9At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.599.5GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
14.499.5GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.799.2GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.298.8GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.898.7GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.698.7GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.998.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.795.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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