Co-expression analysis

Gene ID	Ta.8050.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g05625: binding (HF=5e+0)
Module size	9 genes
NF	0.64
%ile	89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.9	0.98	Ta.8050.1.S1_at	BQ161186	-	-	5e+0	At3g05625	binding	O.I.	H.G.	S.X.	Please select
0.78	91.1	0.98	Ta.1147.1.A1_at	BG908398	-	-	3e+0	At5g55720	pectate lyase family protein	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.98	Ta.1147.1.A1_x_at	BG908398	-	-	3e+0	At5g55720	pectate lyase family protein	O.I.	H.G.	S.X.	Please select
0.70	87.2	0.98	Ta.12065.1.S1_at	BQ171511	-	-	2e+0	At3g45000	VPS24.2	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.23163.1.A1_at	CK216129	-	-	3e-1	At1g06770	DRIP1 (DREB2A-INTERACTING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.1147.3.S1_at	BG908516	-	-	2e+1	At5g41420	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.98	Ta.1147.3.S1_x_at	BG908516	-	-	2e+1	At5g41420	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.98	Ta.1147.2.S1_a_at	CA599073	-	-	8e+0	At4g18692	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.98	Ta.13544.1.S1_a_at	CK215541	-	-	8e-3	At5g21430	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	98.8	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
7.3	98.6	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.9	98.4	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.0	98.0	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.8	97.9	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.7	97.9	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.3	97.6	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.1	97.5	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.9	97.3	GSM324494	Si+ B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.0	96.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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