Co-expression analysis

Gene ID Ta.7913.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g08950: electron transport SCO1/SenC family protein (HF=3e-7)
Module size 15 genes
NF 0.33
%ile 52.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8593.80.96Ta.7913.1.S1_x_atCA718184--3e-7At3g08950electron transport SCO1/SenC family proteinO.I.H.G.S.X.
0.4260.90.97Ta.28206.2.S1_a_atBJ318149--1e+0At5g48530unknown proteinO.I.H.G.S.X.
0.4260.90.97Ta.8969.1.S1_a_atBJ294160--1e-2At5g41190-O.I.H.G.S.X.
0.4260.90.98Ta.7063.2.S1_a_atBJ217714--1e+0At5g12410THUMP domain-containing proteinO.I.H.G.S.X.
0.4058.40.97Ta.7224.1.A1_atBQ801327--1e+0At2g24140unknown proteinO.I.H.G.S.X.
0.3854.70.97Ta.13412.1.S1_atCK207048--4e-2At5g15750RNA-binding S4 domain-containing proteinO.I.H.G.S.X.
0.3753.00.97Ta.7336.2.S1_a_atCA654827--4e+0At1g12244DNA binding / hydrolase, acting on ester bonds / nuclease/ nucleic acid binding / recombinaseO.I.H.G.S.X.
0.3346.90.98Ta.6118.1.A1_atCD453670--1e-2At5g47680-O.I.H.G.S.X.
0.2735.60.98TaAffx.4182.1.S1_atBJ230530--4e+0At5g59990-O.I.H.G.S.X.
0.2735.60.97Ta.9748.2.S1_x_atBJ238030--1e+0At1g04240SHY2 (SHORT HYPOCOTYL 2)O.I.H.G.S.X.
0.2633.60.97Ta.10537.2.A1_atBQ804919--2e-9At5g60990DEAD/DEAH box helicase, putative (RH10)O.I.H.G.S.X.
0.2532.10.97Ta.28393.1.S1_atBG607691--1e-37At3g20050ATTCP-1O.I.H.G.S.X.
0.2532.10.97Ta.380.1.S1_a_atBJ228283--1e-1At4g34680GATA transcription factor 3, putative (GATA-3)O.I.H.G.S.X.
0.2024.00.97Ta.6332.1.S1_atCK153425--7e-7At3g15460brix domain-containing proteinO.I.H.G.S.X.
0.1922.40.97Ta.886.1.S1_atBE401826--1e-2At3g18165MOS4 (Modifier of snc1,4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.298.5GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
5.497.7GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.397.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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